PXD024163-1
PXD024163 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Liceaga / Aguilar-Toala chia seed protein hydrolysate antimicrobial peptides |
| Description | Aguilar-Toala 2019: Investigators under Andrea Liceaga at Department of Food Science at Purdue University examined the proteomes of chia seeds for their anti-microbial properties and enzyme inhibition [doi:10.1007/s00726-020-02879-4 and doi:10.1007/s12602-020-09653-8]. They followed activity for different size exclusion chromatography fractions of peptides generated through alcalase and flavourzyme digestion. Tandem mass spectra were generated on a Q Exactive Plus by Emma Doud in the Proteomics Core at the Indiana University School of Medicine. The LC-MS/MS experiment representing proteins below 3 kDa was emphasized because it represented the biological activity they sought; the instrument produced 44,208 tandem mass spectra at a rate peaking near 11 Hz. When sequence availability for chia proved to be problematic, Doud made use of PEAKS Studio to infer sequences directly from the fragment ions. |
| HostingRepository | MassIVE |
| AnnounceDate | 2021-02-12 |
| AnnouncementXML | Submission_2021-02-12_23:21:39.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Supported dataset by repository |
| PrimarySubmitter | David L. Tabb |
| SpeciesList | scientific name: Salvia hispanica; NCBI TaxID: 49212; |
| ModificationList | Oxidation |
| Instrument | Q Exactive Plus |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2021-02-12 06:18:47 | ID requested | |
| ⏵ 1 | 2021-02-12 23:21:39 | announced |
Publication List
| no publication |
Keyword List
| submitter keyword: chia, alcalase, flavourzyme |
Contact List
| Andrea M. Liceaga | |
|---|---|
| contact affiliation | Purdue University |
| contact email | aliceaga@purdue.edu |
| lab head | |
| David L. Tabb | |
| contact affiliation | Stellenbosch University |
| contact email | dtabb@sun.ac.za |
| dataset submitter | |
Full Dataset Link List
| MassIVE dataset URI |
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000086856/ |
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