PXD023998 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Uropathogenic Escherichia coli biofilm proteomics |
Description | We previously determined that loss of respiratory quinol oxidase cytochrome bd disrupts biofilm formation in uropathogenic Escherichia coli (UPEC). In this study, we extracted and interrogated the outer membrane and extracellular matrix of colony biofilms formed by UPEC isolate UTI89 and an isogenic mutant lacking cytochrome bd (∆cydAB). |
HostingRepository | PRIDE |
AnnounceDate | 2021-04-01 |
AnnouncementXML | Submission_2021-04-01_02:21:15.551.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Connor Beebout |
SpeciesList | scientific name: Escherichia coli; NCBI TaxID: 562; |
ModificationList | No PTMs are included in the dataset |
Instrument | Q Exactive HF |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2021-02-04 22:35:17 | ID requested | |
⏵ 1 | 2021-04-01 02:21:15 | announced | |
2 | 2024-10-22 05:20:40 | announced | 2024-10-22: Updated project metadata. |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: UPEC, Escherichia coli, biofilm |
Contact List
Maria Hadjifrangiskou |
contact affiliation | Department of Pathology, Microbiology, and Immunology; Vanderbilt University Medical Center; Nashville, TN, USA |
contact email | maria.hadjifrangiskou@vumc.org |
lab head | |
Connor Beebout |
contact affiliation | Vanderbilt University |
contact email | connor.j.beebout@vanderbilt.edu |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD023998
- Label: PRIDE project
- Name: Uropathogenic Escherichia coli biofilm proteomics