PXD023959-2

PXD023959 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Ubiquitinated sites on VPS34 by UBE3C LC-MSMS
Description	Ubiquitinated sites on VPS34 identified by LC-MS/MS analysis of VPS34 derived from in vivo ubiquitination assays of UBE3C-transfected or -untransfected 293T cells.
HostingRepository	PRIDE
AnnounceDate	2021-02-19
AnnouncementXML	Submission_2021-04-06_02:57:01.641.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Yu-Hsuan Chen
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	ubiquitination signature dipeptidyl lysine
Instrument	Orbitrap Fusion Lumos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-02-03 01:55:50	ID requested
1	2021-02-19 00:54:45	announced
⏵ 2	2021-04-06 02:57:02	announced	2021-04-06: Updated publication reference for PubMed record(s): 33637724.

Publication List

Chen YH, Huang TY, Lin YT, Lin SY, Li WH, Hsiao HJ, Yan RL, Tang HW, Shen ZQ, Chen GC, Wu KP, Tsai TF, Chen RH, VPS34 K29/K48 branched ubiquitination governed by UBE3C and TRABID regulates autophagy, proteostasis and liver metabolism. Nat Commun, 12(1):1322(2021) [pubmed]

Chen YH, Huang TY, Lin YT, Lin SY, Li WH, Hsiao HJ, Yan RL, Tang HW, Shen ZQ, Chen GC, Wu KP, Tsai TF, Chen RH, VPS34 K29/K48 branched ubiquitination governed by UBE3C and TRABID regulates autophagy, proteostasis and liver metabolism. Nat Commun, 12(1):1322(2021) [pubmed]

Keyword List

submitter keyword: Ubiquitinated sites, VPS34, UBE3C

submitter keyword: Ubiquitinated sites, VPS34, UBE3C

Contact List

Yu-Hsuan Chen
contact affiliation	R602, Institute of Biological Chemistry, Academia Sinica, Taiwan
contact email	dobest2424@gmail.com
lab head
Yu-Hsuan Chen
contact affiliation	Institute of Biological Chemistry, Academia Sinica
contact email	dobest2424@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/02/PXD023959
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/02/PXD023959

PRIDE project URI

Repository Record List

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