PXD023504-1

PXD023504 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Metaproteomes of a cyanobacterial consortium from a haloalkaline bioreactor over a 12 day dark incubation
Description	A photosynthetic cyanobacterial/microbial consortium was incubated in the dark for 12 days. During the course of this dark incubation, samples were taken every two days from the biomass portion and the liquid (supernatant) portion of the bioreactor. Metaproteomics analysis was conducted on these time series samples and binned and assembled metagenomes from the same samples were used as the database for protein identification.
HostingRepository	PRIDE
AnnounceDate	2023-11-01
AnnouncementXML	Submission_2023-11-01_11:49:30.931.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	JackieZorz
SpeciesList	scientific name: Oscillatoriaceae cyanobacterium; NCBI TaxID: 2664179;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive Plus

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-01-11 00:24:35	ID requested
⏵ 1	2023-11-01 11:49:31	announced
2	2023-11-14 09:08:31	announced	2023-11-14: Updated project metadata.
3	2024-10-22 06:13:39	announced	2024-10-22: Updated project metadata.

Publication List

Keyword List

submitter keyword: cyanobacteria, Phormidium,1D-LC, metagenomics, bioenergy, bioreactor, fermentation, phototrophic, metaproteomics, haloalkaline

submitter keyword: cyanobacteria, Phormidium,1D-LC, metagenomics, bioenergy, bioreactor, fermentation, phototrophic, metaproteomics, haloalkaline

Contact List

MarcStrous
contact affiliation	Department of Geoscience, University of Calgary, Calgary Ab,Canada
contact email	mstrous@ucalgary.ca
lab head
JackieZorz
contact affiliation	University of Calgary
contact email	jacqueline.zorz@ucalgary.ca
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/11/PXD023504
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/11/PXD023504

PRIDE project URI

Repository Record List

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