PXD023272-1

PXD023272 is an original dataset announced via ProteomeXchange.

Title	: Pap test, cervical swab, and tumor tissue LC-MS/MS proteomics from a case of high grade serous ovarian cancer.
Description	The aim of this study was to determine whether the residual fixative from a liquid-based Pap test or a swab of the cervix contained proteins that were also found in the primary tumor of a woman with high grade serous ovarian cancer. A total of 4,934 proteins were identified and analyzed. This study is the first step in determining the feasibility of using the liquid-based Pap test or a cervical swab for the detection of ovarian cancer biomarkers
HostingRepository	PRIDE
AnnounceDate	2021-01-12
AnnouncementXML	Submission_2021-01-11_23:54:23.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Kristin Boylan
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2020-12-22 04:26:27	ID requested
⏵ 1	2021-01-11 23:54:24	announced

Boylan KLM, Afiuni-Zadeh S, Geller MA, Argenta PA, Griffin TJ, Skubitz APN, Evaluation of the potential of Pap test fluid and cervical swabs to serve as clinical diagnostic biospecimens for the detection of ovarian cancer by mass spectrometry-based proteomics. Clin Proteomics, 18(1):4(2021) [pubmed]

submitter keyword: ovarian cancer, Pap test, cervical swab, tumor tissue, biomarkers

Amy P.N. Skubitz
contact affiliation	Department of Laboratory Medicine and Pathology, University of Minnesota Medical School, Minneapolis, MN 55455 USA
contact email	skubi002@umn.edu
lab head
Kristin Boylan
contact affiliation	University of Minnesota
contact email	boyla002@umn.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/01/PXD023272

PRIDE project URI

• PRIDE
  1. PXD023272
     1. Label: PRIDE project
     2. Name: : Pap test, cervical swab, and tumor tissue LC-MS/MS proteomics from a case of high grade serous ovarian cancer.