PXD022612-1

PXD022612 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	A comprehensive urine proteome database generated from patients with various renal conditions and prostate cancer
Description	A total of 45 urine samples from 5 prostate cancer (PC) patients, 10 renal transplant patients with proven acute rejection (AR), 10 renal transplant patients with stable graft (STA), 10 non-specific proteinuria patients (NS), and 10 healthy individuals (HI), were utilized for global urine proteome profiling using 2D-LC-MS/MS. Peptides were digested with trypsin then analyzed by LC-MS/MS. Data was searched with MS-GF+ using PNNL's DMS Processing pipeline.
HostingRepository	MassIVE
AnnounceDate	2021-03-30
AnnouncementXML	Submission_2021-03-30_14:50:35.930.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Matthew Monroe
SpeciesList	scientific name: Homo sapiens; common name: human; NCBI TaxID: 9606;
ModificationList	Oxidation; Carbamidomethyl
Instrument	LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2020-11-19 01:59:04	ID requested
⏵ 1	2021-03-30 14:50:36	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: proteomics, urine proteome, human urine

submitter keyword: proteomics, urine proteome, human urine

Contact List

Wei-Jun Qian
contact affiliation	Pacific Northwest National Laboratory
contact email	Weijun.Qian@pnnl.gov
lab head
Matthew Monroe
contact affiliation	Pacific Northwest National Laboratory
contact email	matthew.monroe@pnnl.gov
dataset submitter

Full Dataset Link List

MassIVE dataset URI
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MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000086484/