PXD022323-1

PXD022323 is an original dataset announced via ProteomeXchange.

Title	Deletion of Allele-Specific HLAs (DASH)
Description	Evaluting HLA loss of heterozygosity, a key immune escape mechanism, using NGS and immunopeptidomics.
HostingRepository	PRIDE
AnnounceDate	2021-11-04
AnnouncementXML	Submission_2021-11-04_03:01:43.982.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sean Boyle
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue; monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Fusion Lumos

Revision	Datetime	Status	ChangeLog Entry
0	2020-11-03 05:35:14	ID requested
⏵ 1	2021-11-04 03:01:44	announced
2	2024-10-22 05:30:16	announced	2024-10-22: Updated project metadata.

Dataset with its publication pending

submitter keyword: HLA-LOH, Immunopeptidomics, TMT

Sean Michael Boyle
contact affiliation	Personalis Inc., Menlo Park, USA.
contact email	psnl_dash@personalis.com
lab head
Sean Boyle
contact affiliation	Personalis Inc.
contact email	psnl_dash@personalis.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/11/PXD022323

PRIDE project URI

• PRIDE
  1. PXD022323
     1. Label: PRIDE project
     2. Name: Deletion of Allele-Specific HLAs (DASH)