PXD021342-1

PXD021342 is an original dataset announced via ProteomeXchange.

Title	Microbial processing of jellyfish detritus in the ocean
Description	When jellyfish blooms decay, sinking jellyfish detrital organic matter (jelly-OM), rich in proteins and characterized by a low C : N ratio, becomes a significant source of OM for marine microorganisms. Yet, the key players and the process of microbial jelly-OM degradation and the consequences for marine ecosystems remain unclear. We simulated the scenario potentially experienced by the coastal pelagic microbiome after the decay of a bloom of the cosmopolitan Aurelia aurita s.l.. We show that about half of the jelly-OM is instantly available as dissolved organic matter and thus, exclusively and readily accessible to microbes. During a typical decay of an A. aurita bloom in the northern Adriatic Sea about 100 mg of jelly-OM L-1 becomes available, about 44 µmol L-1 as dissolved organic carbon (DOC), 13 µmol L-1 as total dissolved nitrogen, 11 µmol L-1 of total hydrolysable dissolved amino acids (THDAA) and 0.6 µmol L-1 PO43-. The labile jelly-OM was degraded within 1.5 days (> 98% of proteins, ~ 70% of THDAA (and within ~97% of DFAA) and entire DOC pool) by a consortium of Pseudoalteromonas, Alteromonas and Vibrio. These bacteria accounted for > 90% of all metabolically active jelly-OM degraders, exhibiting high bacterial growth efficiencies. This implies that a major fraction of the detrital jelly-OM is rapidly incorporated into biomass by opportunistic bacteria. Microbial processing of jelly-OM resulted in the accumulation of DON compounds (within some DFAA species, but mostly DCAA) and inorganic nutrients, with possible implications for biogeochemical cycles.
HostingRepository	jPOST
AnnounceDate	2021-09-07
AnnouncementXML	Submission_2021-09-06_08:00:03.795.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Zihao Zhao
SpeciesList	scientific name: cellular organisms; NCBI TaxID: 131567;
ModificationList	S-carboxamidomethyl-L-cysteine; alpha-amino acetylated residue; L-methionine sulfoxide
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2020-09-07 05:30:07	ID requested
⏵ 1	2021-09-06 08:00:04	announced
2	2022-09-18 02:37:28	announced	2022-09-18: Updated FTP location.

Dataset with its publication pending

submitter keyword: Jelly fish

Zihao Zhao
lab head
Zihao Zhao
contact affiliation	University of Vienna
dataset submitter

jPOST dataset URI

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.biosciencedbc.jp/archive/jpostrepos/JPST000960