PXD021137 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | PROTEOMIC IDENTIFICATION OF SYSTEMIC BIOMARKERS IN RAT MODELS OF SPINAL CORD INJURY |
| Description | Biomarkers to more accurately determine severity and prognosis following spinal cord injury (SCI) are needed to ensure that patients are assigned to the most suitable treatment and rehabilitation regimes. This study aimed to characterise the blood proteome following SCI in clinical rat injury models to identify novel candidate biomarkers and altered biological pathways. |
| HostingRepository | PRIDE |
| AnnounceDate | 2022-05-19 |
| AnnouncementXML | Submission_2022-05-19_09:13:35.591.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Sally Shirran |
| SpeciesList | scientific name: Rattus norvegicus (Rat); NCBI TaxID: 10116; |
| ModificationList | iTRAQ4plex-116 reporter+balance reagent acylated residue |
| Instrument | TripleTOF 5600 |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2020-08-26 04:28:26 | ID requested | |
| ⏵ 1 | 2022-05-19 09:13:36 | announced | |
Publication List
| Hulme CH, Fuller HR, Riddell J, Shirran SL, Botting CH, Osman A, Wright KT, Investigation of the blood proteome in response to spinal cord injury in rodent models. Spinal Cord, 60(4):320-325(2022) [pubmed] |
Keyword List
| submitter keyword: Spinal cord injury |
| SCI |
| iTRAQ proteomics |
| complete transection SCI |
| contusion SCI |
Contact List
| Karina T. Wright |
|---|
| contact affiliation | 1. School of Pharmacy and Bioengineering, Keele University, Keele, Staffordshire, UK 2. Midlands Centre for Spinal Injuries, RJAH Orthopaedic Hospital, Oswestry, Shropshire, UK. |
| contact email | karina.wright1@nhs.net |
| lab head | |
| Sally Shirran |
|---|
| contact affiliation | University of St Andrews |
| contact email | ss101@st-andrews.ac.uk |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/05/PXD021137 |
| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD021137
- Label: PRIDE project
- Name: PROTEOMIC IDENTIFICATION OF SYSTEMIC BIOMARKERS IN RAT MODELS OF SPINAL CORD INJURY
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