⮝ Full datasets listing
PXD020987-1
PXD020987 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Quantitative LC-MS/MS Proteomics of human small intestine |
| Description | The objective was to determine the expression of a wide range proteins pertinent to metabolism and disposition of chemicals and nutrients in the intestinal epithelium. Ileum and jejunum biopsy specimens were obtained from 16 patients undergoing gastrointestinal elective surgery. Mucosal fractions were prepared and analysed using targeted and global proteomic approaches. A total of 29 enzymes, 32 transporters, 6 tight junction proteins, 2 adhesion proteins, alkaline phosphatase, thioredoxin, 5 markers and 1 regulatory protein were quantified; 60 for the first time. |
| HostingRepository | PRIDE |
| AnnounceDate | 2021-09-09 |
| AnnouncementXML | Submission_2021-09-09_07:10:34.870.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Jill Barber |
| SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
| ModificationList | No PTMs are included in the dataset |
| Instrument | Q Exactive HF |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2020-08-18 22:58:00 | ID requested | |
| ⏵ 1 | 2021-09-09 07:10:35 | announced |
Publication List
Keyword List
| submitter keyword: Human, jejunum, ileum, small intestine, gut, LC-MS/MS, quantitative proteomics |
Contact List
| Jill Barber | |
|---|---|
| contact affiliation | Centre for Applied Pharmacokinetic Research, School of Health Sciences, The University of Manchester, UK |
| contact email | jill.barber@manchester.ac.uk |
| lab head | |
| Jill Barber | |
| contact affiliation | The University of Manchester |
| contact email | Jill.barber@manchester.ac.uk |
| dataset submitter | |
Full Dataset Link List
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/09/PXD020987 |
| PRIDE project URI |
Repository Record List
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