PXD020780 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Identification of proteins associated with the decapping complex and the endonuclease DNE1 in Arabidopsis |
Description | In this work, we used an unbiased approach coupling immunoprecipitations (IPs) and mass spectrometry to define the interactome of the decapping activator DCP1 and the decapping enzyme DCP2. In addition we unravel the interactome of the endonuclease DNE1 harboring an endoribonuclease domain of the NYN family. |
HostingRepository | PRIDE |
AnnounceDate | 2021-11-16 |
AnnouncementXML | Submission_2021-11-16_04:21:25.346.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Lauriane Kuhn |
SpeciesList | scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702; |
ModificationList | acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2020-08-06 23:17:14 | ID requested | |
⏵ 1 | 2021-11-16 04:21:25 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: mRNA Decapping, DCP1, DNE1, RNA degradation, NYN domain, P-bodies, Proteome, Mass spectrometry |
Contact List
Damien Garcia |
contact affiliation | Institut de biologie moléculaire des plantes, CNRS, Université de Strasbourg, Strasbourg, France |
contact email | damien.garcia@ibmp-cnrs.unistra.fr |
lab head | |
Lauriane Kuhn |
contact affiliation | CNRS, IBMC, FRC1589 |
contact email | l.kuhn@ibmc-cnrs.unistra.fr |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD020780
- Label: PRIDE project
- Name: Identification of proteins associated with the decapping complex and the endonuclease DNE1 in Arabidopsis