PXD020761 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | A comprehensive spectral assay library to quantify the Escherichia coli proteome by DIA/SWATH-MS |
Description | A comprehensive and high-quality E. coli spectral assay library for 56,182 proteotypic peptides mapped to 4,014 (91.5%) of the 4,389 annotated proteins using one- and two-dimensional fractionated samples, and ion mobility separation. |
HostingRepository | PRIDE |
AnnounceDate | 2020-10-19 |
AnnouncementXML | Submission_2020-11-17_08:48:27.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Mukul Midha |
SpeciesList | scientific name: Escherichia coli; NCBI TaxID: 562; |
ModificationList | monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | TripleTOF 6600 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2020-08-05 23:58:46 | ID requested | |
1 | 2020-10-18 22:56:56 | announced | |
⏵ 2 | 2020-11-17 08:48:28 | announced | 2020-11-17: Updated publication reference for PubMed record(s): 33184295. |
Publication List
Midha MK, Kusebauch U, Shteynberg D, Kapil C, Bader SL, Reddy PJ, Campbell DS, Baliga NS, Moritz RL, A comprehensive spectral assay library to quantify the Escherichia coli proteome by DIA/SWATH-MS. Sci Data, 7(1):389(2020) [pubmed] |
Keyword List
submitter keyword: E. coli, DIA-MS, Spectral assay library |
Contact List
Robert L. Moritz |
contact affiliation | Professor and Head Moritz group, Proteomics lab Institute for systems biology Seattle, WA, USA |
contact email | rmoritz@systemsbiology.org |
lab head | |
Mukul Midha |
contact affiliation | Institute for Systems Biology |
contact email | mmidha@systemsbiology.org |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/10/PXD020761 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD020761
- Label: PRIDE project
- Name: A comprehensive spectral assay library to quantify the Escherichia coli proteome by DIA/SWATH-MS