PXD020518 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Innate and adaptive serum proteomes of Santa Gertrudis cattle in response to Rhipicephalus microplus infestation |
Description | Previous studies have applied genomics and transcriptomics to identify the immune and genetic markers as key indicator traits for cattle tick susceptibility/resistance, however, results differed between breeds, and host proteomics and metabolomics were not considered. We used serum samples from Santa Gertrudis cattle phenotypically divided into groups as tick-resistant (TR) and -susceptible (TS) to conduct differential abundance analyses of protein profiles between the two groups. The serum proteins were digested into peptides followed by identification and quantification by sequential window acquisition of all instances of theoretical fragment ion mass spectrometry (SWATH-MS). |
HostingRepository | PRIDE |
AnnounceDate | 2024-05-10 |
AnnouncementXML | Submission_2024-05-10_15:45:26.748.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Ali Raza |
SpeciesList | scientific name: Bos taurus (Bovine); NCBI TaxID: 9913; |
ModificationList | No PTMs are included in the dataset |
Instrument | TripleTOF 5600 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2020-07-22 23:11:57 | ID requested | |
⏵ 1 | 2024-05-10 15:45:27 | announced | |
Publication List
10.1111/pim.12836; |
Raza A, Schulz BL, Nouwens A, Jackson LA, Piper EK, James P, Jonsson NN, Tabor AE, Serum proteomes of Santa Gertrudis cattle before and after infestation with Rhipicephalus australis ticks. Parasite Immunol, 43(7):e12836(2021) [pubmed] |
Keyword List
submitter keyword: Serum,Cattle, Host resistance, Rhipicephalus microplus, Proteomics |
Contact List
Ala Tabor |
contact affiliation | Centre for Animal Science Queensland Alliance for Agriculture and Food Innovation, University of Queensland, Australia |
contact email | a.tabor@uq.edu.au |
lab head | |
Ali Raza |
contact affiliation | University of Queensland |
contact email | a.raza@uq.edu.au |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/05/PXD020518 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD020518
- Label: PRIDE project
- Name: Innate and adaptive serum proteomes of Santa Gertrudis cattle in response to Rhipicephalus microplus infestation