PXD020170-2

PXD020170 is an original dataset announced via ProteomeXchange.

Title	Pol IV-RDR2 protein interaction study
Description	Protein-protein interaction between DNA dependent RNA polymerase IV and RNA dependent RNA polymerase2. The coupled activities of the physically associated polymerases lead to the biogenesis of dsRNAs that serve as precursors of 24nt siRNAs.
HostingRepository	PRIDE
AnnounceDate	2020-09-14
AnnouncementXML	Submission_2021-03-24_11:13:56.781.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Yixiang Zhang
SpeciesList	scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion Lumos

Revision	Datetime	Status	ChangeLog Entry
0	2020-07-02 23:47:53	ID requested
1	2020-09-13 22:15:07	announced
⏵ 2	2021-03-24 11:13:57	announced	2021-03-24: Updated publication reference for PubMed record(s): 33753485.

Mishra V, Singh J, Wang F, Zhang Y, Fukudome A, Trinidad JC, Takagi Y, Pikaard CS, Assembly of a dsRNA synthesizing complex: RNA-DEPENDENT RNA POLYMERASE 2 contacts the largest subunit of NUCLEAR RNA POLYMERASE IV. Proc Natl Acad Sci U S A, 118(13):(2021) [pubmed]

submitter keyword: siRNA, RNA directed DNA methylation, RNA polymerase, dsRNA

Prof. Craig S Pikaard
contact affiliation	Howard Hughes Medical Institute, Department of Biology, Indiana University, Bloomington, Indiana, USA
contact email	cpikaard@indiana.edu
lab head
Yixiang Zhang
contact affiliation	Indiana University
contact email	alexzhangyx@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/09/PXD020170

PRIDE project URI

• PRIDE
  1. PXD020170
     1. Label: PRIDE project
     2. Name: Pol IV-RDR2 protein interaction study