PXD019622 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Label free shotgun proteomics to disclose the impact of methionine-enriched diets in the liver of European seabass |
Description | Plant-based protein sources play an important role in aquaculture by dwindling fish meal to sustainable levels. However, the use of such feedstuffs requires nutrient supplementation to fulfil fish nutritional requirements. This work addressed the response in the liver of farmed fish to dietary methionine (Met), assessing at the same time the growth performance. Fish were fed at suboptimal levels of dietary Met (0.77% w/w; M0.65 diet), within (1% w/w Met; M0.85 diet)and above(1.36 % w/w Met (M1.25 diet); 1.66% w/w Met(M1.5 diet)) the estimated requirement for this species, in a total of four tested conditions. The impact of dietary methionine supplementation in seabass juvenile’s performance was assessed through 85 days of trial, between May and August of 2018. Fish were reared in triplicate tanks and three liver samples/tank (9 per treatment) were collected for liver proteome analysis at the end of the trial i.e., after 85 days of feeding. |
HostingRepository | PRIDE |
AnnounceDate | 2020-11-25 |
AnnouncementXML | Submission_2020-11-24_23:07:52.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD019622 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Ana Paula Farinha |
SpeciesList | scientific name: Dicentrarchus labrax; NCBI TaxID: 13489; |
ModificationList | acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2020-06-06 15:28:51 | ID requested | |
⏵ 1 | 2020-11-24 23:07:52 | announced | |
Publication List
Farinha AP, Schrama D, Silva T, Concei, ç, ã, o LEC, Colen R, Engrola S, Rodrigues P, Cerqueira M, Evaluating the impact of methionine-enriched diets in the liver of European seabass through label-free shotgun proteomics. J Proteomics, 232():104047(2021) [pubmed] |
Keyword List
submitter keyword: European seabass ( (Dicentrarchus labrax), liver, nutrition, methionine |
Contact List
Pedro Miguel Rodrigues |
contact affiliation | CCMAR (Center of Marine Sciences, Universidade do Algarve,Campus de Gambelas, Portugal |
contact email | pmrodrig@ualg.pt |
lab head | |
Ana Paula Farinha |
contact affiliation | Universidade Algarve |
contact email | apaula.farinha@gmail.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD019622
- Label: PRIDE project
- Name: Label free shotgun proteomics to disclose the impact of methionine-enriched diets in the liver of European seabass