PXD019572-1

PXD019572 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Quantitative data-independent acquisition glycoproteomics of sparkling wine
Description	We developed an automated workflow that created ion libraries to analyse Sequential Window Acquisition of all THeoretical mass spectra (SWATH) Data Independent Acquisition (DIA) mass spectrometry data based on glycopeptides identified by Byonic. We applied our workflow to three pairs of experimental sparkling wines to assess the effects of aging on lees and of different yeasts strains used in Liqueur de Triage for secondary fermentation.
HostingRepository	PRIDE
AnnounceDate	2020-09-18
AnnouncementXML	Submission_2020-09-18_01:17:58.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Cassandra Pegg
SpeciesList	scientific name: Vitis vinifera (Grape); NCBI TaxID: 29760; scientific name: Saccharomyces cerevisiae (Baker's yeast); NCBI TaxID: 4932;
ModificationList	complex glycosylation
Instrument	TripleTOF 5600

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2020-06-04 04:29:52	ID requested
⏵ 1	2020-09-18 01:17:59	announced
2	2024-10-22 05:12:25	announced	2024-10-22: Updated project metadata.

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: Glycoproteomics, DIA, SWATH, Byonic, Sparkling Wine

submitter keyword: Glycoproteomics, DIA, SWATH, Byonic, Sparkling Wine

Contact List

Benjamin L. Schulz
contact affiliation	School of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia QLD, Australia, 4072
contact email	b.schulz@uq.edu.au
lab head
Cassandra Pegg
contact affiliation	University of Queensland
contact email	cassandra.pegg@uqconnect.edu.au
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/09/PXD019572
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/09/PXD019572

PRIDE project URI

Repository Record List

[ + ]