PXD019478 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Analysis of protein expression change upon RBMS1 knockdown |
Description | To assess how dpeletion of RBMS1 affects the proteome, SW480 colon adenocarcinoma cells expressing control or RBMS1 shRNAs were compared by Tandem Mass Tagging (TMT) protoemics. |
HostingRepository | PRIDE |
AnnounceDate | 2020-06-10 |
AnnouncementXML | Submission_2020-06-10_04:43:05.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Faraz Mardakheh |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | No PTMs are included in the dataset |
Instrument | Q Exactive Plus |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2020-05-29 18:12:24 | ID requested | |
⏵ 1 | 2020-06-10 04:43:06 | announced | |
Publication List
Yu J, Navickas A, Asgharian H, Culbertson B, Fish L, Garcia K, Olegario JP, Dermit M, Dodel M, H, รค, nisch B, Luo Y, Weinberg EM, Dienstmann R, Warren RS, Mardakheh FK, Goodarzi H, RBMS1 Suppresses Colon Cancer Metastasis through Targeted Stabilization of Its mRNA Regulon. Cancer Discov, 10(9):1410-1423(2020) [pubmed] |
Keyword List
submitter keyword: RBMS1 |
TMT |
RNA Binding Protein |
Contact List
Faraz Mardakheh |
contact affiliation | Barts Cancer Institute, Queen Mary University of London, Chareterhouse square, London EC1M 6BQ, UK. |
contact email | f.mardakheh@qmul.ac.uk |
lab head | |
Faraz Mardakheh |
contact affiliation | Barts Cancer Institute |
contact email | f.mardakheh@qmul.ac.uk |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/06/PXD019478 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD019478
- Label: PRIDE project
- Name: Analysis of protein expression change upon RBMS1 knockdown