PXD019080-1

PXD019080 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	CCCP MS: Click and Chemical Cross-link Pulldowns of RNA interacting protein complexes for Mass Spectrometry-based identification
Description	A workflow to isolate RNA binding proteins: Cells were labeled with an unnatural RNA base and cross linked with aldehyde. Cells were lysed and RNA protein complexes were immobilized to beads via click chemistry.
HostingRepository	jPOST
AnnounceDate	2021-05-11
AnnouncementXML	Submission_2021-05-10_08:00:05.309.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jürgen Eirich
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	S-carboxamidomethyl-L-cysteine; N6-acetyl-L-lysine; L-methionine sulfoxide
Instrument	LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2020-05-11 07:13:06	ID requested
⏵ 1	2021-05-10 08:00:05	announced
2	2022-09-18 02:14:43	announced	2022-09-18: Updated FTP location.

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: chemical proteomics, click chemistry, pull down, RNA binding proteins, RBP, label free

submitter keyword: chemical proteomics, click chemistry, pull down, RNA binding proteins, RBP, label free

Contact List

Janne Lehtio
lab head
Jürgen Eirich
contact affiliation	University of Münster - WWU - Institute for Biology and Biotechnology of Plants
dataset submitter

Full Dataset Link List

jPOST dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.biosciencedbc.jp/archive/jpostrepos/JPST000296

jPOST dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.biosciencedbc.jp/archive/jpostrepos/JPST000296