PXD018933-1

PXD018933 is an original dataset announced via ProteomeXchange.

Title	Protein sequence comparison of human and non-human primate tooth proteomes
Description	In the context of human evolution, the study of proteins may overcome the limitation of the high degradation of ancient DNA over time for providing biomolecular information useful to precise the phylogeny of hominid taxa. Here, we have analysed and compared the tooth proteome of five extant primates (human, gorilla, chimpanzee, orangutan and baboon) using a shotgun proteomics approach. Twenty five proteins were shared by the five datasets, and may be considered as the most representative tooth proteins with a chance of being retrieved from older samples. Some of them were identified by peptides specific to the species, thus allowing to draw up a combinatory panel of peptides with species signature that could be helpful for the taxonomic characterization of ancient samples
HostingRepository	PRIDE
AnnounceDate	2020-11-17
AnnouncementXML	Submission_2020-11-17_08:38:44.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Emmanuelle Mouton Barbosa
SpeciesList	scientific name: Pongo abelii; NCBI TaxID: 9601; scientific name: Pan troglodytes (Chimpanzee); NCBI TaxID: 9598; scientific name: Gorilla gorilla gorilla; NCBI TaxID: 9595; scientific name: Papio hamadryas; NCBI TaxID: 9557; scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	carbamoylated residue; monohydroxylated residue; iodoacetamide derivatized residue; deamidated residue
Instrument	Orbitrap Fusion ETD

Revision	Datetime	Status	ChangeLog Entry
0	2020-04-30 05:29:33	ID requested
⏵ 1	2020-11-17 08:38:44	announced
2	2024-10-22 05:15:14	announced	2024-10-22: Updated project metadata.

Dataset with its publication pending

submitter keyword: Paleoproteomics, Tooth, Primates, nanoLC-MS/MS, Taxonomy

Catherine Mollereai
contact affiliation	Laboratoire d’Anthropologie Moléculaire et Imagerie de Synthèse (AMIS), Université de Toulouse, CNRS, UPS, Toulouse, France
contact email	catherine.mollereau-manaute@ipbs.fr
lab head
Emmanuelle Mouton Barbosa
contact affiliation	IPBS CNRS
contact email	emmanuelle.mouton@ipbs.fr
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/11/PXD018933

PRIDE project URI

• PRIDE
  1. PXD018933
     1. Label: PRIDE project
     2. Name: Protein sequence comparison of human and non-human primate tooth proteomes