PXD018913-1
PXD018913 is an original dataset announced via ProteomeXchange.
Dataset Summary
Title | DIA analysis of colorectal cancer organoids |
Description | The goal of this project was to characterize the proteome and phosphoproteome of colorectal cancer organoids. |
HostingRepository | PRIDE |
AnnounceDate | 2023-12-11 |
AnnouncementXML | Submission_2023-12-11_04:04:29.488.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Peter Blattmann |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | phosphorylated residue; monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Orbitrap Fusion Lumos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
---|---|---|---|
0 | 2020-04-29 15:08:45 | ID requested | |
⏵ 1 | 2023-12-11 04:04:30 | announced | |
2 | 2024-10-22 06:17:19 | announced | 2024-10-22: Updated project metadata. |
Publication List
10.1016/j.isci.2023.108399; |
Plattner C, Lamberti G, Blattmann P, Kirchmair A, Rieder D, Loncova Z, Sturm G, Scheidl S, Ijsselsteijn M, Fotakis G, Noureen A, Lisandrelli R, B, ö, ck N, Nemati N, Krogsdam A, Daum S, Finotello F, Somarakis A, Sch, ä, fer A, Wilflingseder D, Gonzalez Acera M, Ö, fner D, Huber LA, Clevers H, Becker C, Farin HF, Greten FR, Aebersold R, de Miranda NFCC, Trajanoski Z, Functional and spatial proteomics profiling reveals intra- and intercellular signaling crosstalk in colorectal cancer. iScience, 26(12):108399(2023) [pubmed] |
Keyword List
submitter keyword: organoids, Prostate,SPOP |
Contact List
Ruedi Aebersold | |
---|---|
contact affiliation | 1) Department of Biology, Institute of Molecular Systems Biology, ETH Zurich, Switzerland 2) Faculty of Science, University of Zurich, Zurich, Switzerland |
contact email | aebersold@imsb.biol.ethz.ch |
lab head | |
Peter Blattmann | |
contact affiliation | Idorsia Pharmaceuticals Ltd |
contact email | blattmann@imsb.biol.ethz.ch |
dataset submitter |
Full Dataset Link List
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/12/PXD018913 |
PRIDE project URI |
Repository Record List
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