PXD018894-1

PXD018894 is an original dataset announced via ProteomeXchange.

Title	CALCOCO1 acts with VAMP-Associated Proteins to mediate ER-phagy
Description	To explore the interaction partners of CALCOCO1, we immunoprecipitated EGFP-CALCOCO1 from HEK 293 cells’ lysate and identified the bound proteins by mass spectrometry. The identified proteins were then filtered against GFP control.
HostingRepository	PRIDE
AnnounceDate	2020-06-02
AnnouncementXML	Submission_2020-06-02_06:10:02.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jack-Ansgar Bruun
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2020-04-29 03:32:48	ID requested
⏵ 1	2020-06-02 06:10:03	announced
2	2024-10-22 05:06:35	announced	2024-10-22: Updated project metadata.

Dataset with its publication pending

submitter keyword: Autophagy, CALCOCO1, ER-phagy, VAPA, VAPB, FFAT motif, Golgi

Terje Johansen
contact affiliation	Molecular Cancer Research Group, Department of Medical Biology, University of Tromsø – The Arctic University of Norway, 9037 Tromsø, Norway
contact email	terje.johansen@uit.no
lab head
Jack-Ansgar Bruun
contact affiliation	University of Tromsø
contact email	jack-ansgar.bruun@uit.no
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/06/PXD018894

PRIDE project URI

• PRIDE
  1. PXD018894
     1. Label: PRIDE project
     2. Name: CALCOCO1 acts with VAMP-Associated Proteins to mediate ER-phagy