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PXD018771 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleProteome-wide cross-linking mass spectrometry of human K562 cells
DescriptionProteome-wide cross-linking mass spectrometry was performed on human K562 cell lysates. MS2-MS3 fragmentation strategy was used to aquire the XL-MS data. The raw files in this dataset are a subset of PXD013928.
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterKumar Yugandhar
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListmonohydroxylated residue; iodoacetamide derivatized residue
InstrumentOrbitrap Fusion Lumos
Dataset History
RevisionDatetimeStatusChangeLog Entry
02020-04-24 01:17:59ID requested
12020-07-01 06:43:02announced
22020-10-12 06:51:20announced2020-10-12: Updated publication reference for PubMed record(s): 32994567.
Publication List
Yugandhar K, Wang TY, Wierbowski SD, Shayhidin EE, Yu H, Structure-based validation can drastically underestimate error rate in proteome-wide cross-linking mass spectrometry studies. Nat Methods, 17(10):985-988(2020) [pubmed]
Keyword List
submitter keyword: Human, cross-linking mass spectrometry, proteome-wide, protein-protein, interaction
Contact List
Haiyuan Yu
contact affiliationCornell University, USA
contact emailhaiyuan.yu@cornell.edu
lab head
Kumar Yugandhar
contact affiliationCornell University
contact emailkk665@cornell.edu
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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