PXD018594-2

PXD018594 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Shotgun proteomics of Vero E6 cells infected by Italy-INMI1 SARS-CoV-2 virus
Description	Next-generation proteomics of Vero E6 cells infected by Italy-INMI1 SARS-CoV-2 virus for defining the kinetics of whole viral particle antigen production for vaccines. Cells from Day1, Day2, Day3, Day4, Day7 post-infection at two multiplicities of infection.
HostingRepository	PRIDE
AnnounceDate	2020-06-03
AnnouncementXML	Submission_2020-07-07_06:37:00.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD018594
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Jean ARMENGAUD
SpeciesList	scientific name: Betacoronavirus sp.; NCBI TaxID: 1928434; scientific name: Chlorocebus aethiops aethiops; NCBI TaxID: 101841;
ModificationList	Deamidated; Oxidation; Carbamidomethyl
Instrument	Q Exactive HF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2020-04-15 22:23:56	ID requested
1	2020-05-29 00:54:36	announced
⏵ 2	2020-07-07 06:37:01	announced	2020-07-07: Updated publication reference for PubMed record(s): 32619390.

Publication List

Grenga L, Gallais F, Pible O, Gaillard JC, Gouveia D, Batina H, Bazaline N, Ruat S, Culotta K, Miotello G, Debroas S, Roncato MA, Steinmetz G, Foissard C, Desplan A, Alpha-Bazin B, Almunia C, Gas F, Bellanger L, Armengaud J, Shotgun proteomics analysis of SARS-CoV-2-infected cells and how it can optimize whole viral particle antigen production for vaccines. Emerg Microbes Infect, 9(1):1712-1721(2020) [pubmed]

Grenga L, Gallais F, Pible O, Gaillard JC, Gouveia D, Batina H, Bazaline N, Ruat S, Culotta K, Miotello G, Debroas S, Roncato MA, Steinmetz G, Foissard C, Desplan A, Alpha-Bazin B, Almunia C, Gas F, Bellanger L, Armengaud J, Shotgun proteomics analysis of SARS-CoV-2-infected cells and how it can optimize whole viral particle antigen production for vaccines. Emerg Microbes Infect, 9(1):1712-1721(2020) [pubmed]

Keyword List

ProteomeXchange project tag: Sars-cov-2, Covid-19
submitter keyword: coronavirus, SARS-CoV-2, COVID-19, virus, kinetics, viral particle, host response, severe acute respiratory syndrome, vaccine

ProteomeXchange project tag: Sars-cov-2, Covid-19

submitter keyword: coronavirus, SARS-CoV-2, COVID-19, virus, kinetics, viral particle, host response, severe acute respiratory syndrome, vaccine

Contact List

Jean Armengaud
contact affiliation	CEA-Marcoule, ProGénoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Cèze, France
contact email	jean.armengaud@cea.fr
lab head
Jean ARMENGAUD
contact affiliation	Li2D
contact email	jean.armengaud@cea.fr
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/06/PXD018594
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/06/PXD018594

PRIDE project URI

Repository Record List

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