PXD018513 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Metaproteomic analysis of microbial community structure and function in the South China Sea |
Description | In the present study, we studied microbial composition and metabolic activity in the euphotic zone of the South China Sea. 8 samples were collected and subjected to metaproteomic analysis. Our results suggested that mixotrophic phototrophs-driven NDL carbon fixation along with phytoplankton-driven NRL carbon fixation determined primary production in the oligotrophic ocean’s euphotic zone. |
HostingRepository | PRIDE |
AnnounceDate | 2024-06-16 |
AnnouncementXML | Submission_2024-06-15_23:35:16.245.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | keqiang yan |
SpeciesList | scientific name: phytoplankton environmental sample; NCBI TaxID: 1249885; |
ModificationList | No PTMs are included in the dataset |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2020-04-14 01:53:10 | ID requested | |
⏵ 1 | 2024-06-15 23:35:17 | announced | |
Publication List
10.1126/sciadv.adj8184; |
Chen S, Xie ZX, Yan KQ, Chen JW, Li DX, Wu PF, Peng L, Lin L, Dong CM, Zhao Z, Fan GY, Liu SQ, Herndl GJ, Wang DZ, Functional vertical connectivity of microbial communities in the ocean. Sci Adv, 10(21):eadj8184(2024) [pubmed] |
Keyword List
submitter keyword: metaproteomics, South China Sea; |
Contact List
Dazhi Wang |
contact affiliation | Xiamen University |
contact email | dzwang@xmu.edu.cn |
lab head | |
keqiang yan |
contact affiliation | BGI |
contact email | yankeqiang@genomics.cn |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/06/PXD018513 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD018513
- Label: PRIDE project
- Name: Metaproteomic analysis of microbial community structure and function in the South China Sea