PXD018461 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Copper Limitation in Nitrososphaera viennensis |
Description | Pure cultures of N. viennensis were subjected to copper limitation using the copper chelator TETA. Two samples that were subjected to copper limiation for approximately two weeks were used for protein extraction and subsequent proteomic analysis. |
HostingRepository | PRIDE |
AnnounceDate | 2020-07-15 |
AnnouncementXML | Submission_2020-07-19_21:48:59.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD018461 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Logan Hodgskiss |
SpeciesList | scientific name: Nitrososphaera viennensis EN76; NCBI TaxID: 926571; |
ModificationList | acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Q Exactive Plus |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2020-04-10 14:30:45 | ID requested | |
1 | 2020-07-14 22:40:40 | announced | |
⏵ 2 | 2020-07-19 21:49:00 | announced | 2020-07-20: Updated publication reference for PubMed record(s): 32665710. |
Publication List
Reyes C, Hodgskiss LH, Kerou M, Pribasnig T, Abby SS, Bayer B, Kraemer SM, Schleper C, Genome wide transcriptomic analysis of the soil ammonia oxidizing archaeon Nitrososphaera viennensis upon exposure to copper limitation. ISME J, 14(11):2659-2674(2020) [pubmed] |
Keyword List
submitter keyword: copper, ammonia oxidizing archaea, soil |
Contact List
Christa Schleper |
contact affiliation | Archaea Biology and Ecogenomics Division University of Vienna |
contact email | christa.schleper@univie.ac.at |
lab head | |
Logan Hodgskiss |
contact affiliation | University of Vienna |
contact email | logan.hodgskiss@univie.ac.at |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/07/PXD018461 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD018461
- Label: PRIDE project
- Name: Copper Limitation in Nitrososphaera viennensis