PXD018179 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Differential expression pattern of the proteome in response to cadmium stress based on proteomics analysis of wheat roots |
Description | Background: Heavy metal cadmium (Cd) is a common environmental pollutant in soils, which has an negative impacts on crop growth and development. At present, cadmium has become a major soil and water heavy metal pollutant, which not only causes permanent and irreversible health problems for humans, but also causes a significant reduction in crop yields. Results: This study examined the chemical forms of Cd in the roots of two wheat varieties (M1019 and Xinong20) by continuous extraction and analyzed differences in distribution characteristics of Cd in the root cell wall, cytoplasm, and organelles by elemental content determination and subcellular separation. Furthermore, we conducted proteomics analysis of the roots of the two varieties under Cd pollution using mass spectrometry quantitative proteomics techniques. A total of 11,651 proteins were identified, of which 10,532 proteins contained quantitative information. In addition, the differentially expressed proteins in the two varieties were related to DNA replication and repair, protein metabolism, and the glutathione metabolism pathway. Conclusion: The results of this study improve our understanding of the mechanism of plant responses to Cd stress. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_05:01:25.993.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | maling Jian |
SpeciesList | scientific name: Triticum aestivum (Wheat); NCBI TaxID: 4565; |
ModificationList | No PTMs are included in the dataset |
Instrument | Orbitrap Fusion Lumos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2020-03-24 23:42:48 | ID requested | |
1 | 2020-03-30 04:22:37 | announced | |
⏵ 2 | 2024-10-22 05:01:26 | announced | 2024-10-22: Updated project metadata. |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: Cd stress |
wheat roots |
chemical forms |
proteomics analysis |
Contact List
Lingjian Ma |
contact affiliation | College of Horticulture, Northwest A&F University |
contact email | malingjian@nwsuaf.edu.cn |
lab head | |
maling Jian |
contact affiliation | Northwest A&F University, College of Agronomy |
contact email | malingjian@nwsuaf.edu.cn |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD018179
- Label: PRIDE project
- Name: Differential expression pattern of the proteome in response to cadmium stress based on proteomics analysis of wheat roots