⮝ Full datasets listing

PXD018006-1

PXD018006 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleIlluminating the key biological processes during the blooming period of a marine dinoflagellate by metaproteomics
DescriptionDinoflagellate blooms are natural phenomena that have drawn global attention due to their huge negative impacts on marine ecosystems, mariculture and human health. Although the understanding of dinoflagellate blooms has been significantly improved over the past half century, little is known about the underlying mechanisms sustaining the high biomass growth rate during the bloom period which is paradoxically characterized by low dissolved CO2 and inorganic nutrients. Here, we compared the metaproteomes of non-bloom, mid-bloom and late-bloom cells of a marine dinoflagellate Prorocentrum donghaiense in the coastal East China Sea, to understand the underlying mechanisms sustaining high biomass growth rate under the typically low CO2 and inorganic nutrient conditions.
HostingRepositoryPRIDE
AnnounceDate2021-01-21
AnnouncementXMLSubmission_2021-01-20_23:54:37.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterHongkai Xu
SpeciesList scientific name: Prorocentrum donghaiense; NCBI TaxID: 257771;
ModificationListmonohydroxylated residue; iodoacetamide derivatized residue; deamidated residue
InstrumentQ Exactive HF
Dataset History
RevisionDatetimeStatusChangeLog Entry
02020-03-12 00:22:42ID requested
12021-01-20 23:54:37announced
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: Marine dinoflagellates, harmful algal bloom, metaproteomics
Contact List
Siqi Liu
contact affiliationBGI-Research
contact emailsiqiliu@genomics.cn
lab head
Hongkai Xu
contact affiliationBGI
contact emailxuhongkai@genomics.cn
dataset submitter
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/01/PXD018006
PRIDE project URI
Repository Record List
[ + ]