PXD017844-2

PXD017844 is an original dataset announced via ProteomeXchange.

Title	16S rRNA sequences from a longitudinal study on infants
Description	The objective of the present study was to identify the nutrient utilization and the SCFA production potential of gut microbes during the first year of life. The 16S sequencing data represents 100 mother-child pairs, longitudinally for the infants (0, 3mo, 6mo and 12mo) and mothers 18 weeks pregnancy. We wanted to identify the SCFA composition in pregnant woman and their infants through the first year of life, and their correlation to gut bacteria and other influencal factors. Metaproteomics on selected infants were analyzed to look for nutrient sources used by potential SCFA producers.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:31:43.836.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Morten Nilsen
SpeciesList	scientific name: prokaryotic environmental samples; NCBI TaxID: 81490;
ModificationList	monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue; deamidated residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2020-03-03 04:28:50	ID requested
1	2022-02-15 10:54:43	announced
⏵ 2	2024-10-22 05:31:44	announced	2024-10-22: Updated project metadata.

Nilsen M, Madelen Saunders C, Leena Angell I, Arntzen M Ø, L, ø, drup Carlsen KC, Carlsen KH, Haugen G, Hagen LH, Carlsen MH, Hedlin G, Jonassen CM, Nordlund B, Rehbinder EM, Skjerven HO, Snipen L, Staff AC, Vettukattil R, Rudi K, . Genes (Basel), 11(11):(2020) [pubmed]

10.3390/genes11111245;

submitter keyword: Human, Infants, Fecal-samples

Knut Rudi
contact affiliation	Norwegian University of Life Sciences - Faculty of Chemistry, Biotechnology and Food Science
contact email	knut.rudi@nmbu.no
lab head
Morten Nilsen
contact affiliation	Norwegian University of Life Sciences
contact email	morten.nilsen@nmbu.no
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/09/PXD017844

PRIDE project URI

• PRIDE
  1. PXD017844
     1. Label: PRIDE project
     2. Name: 16S rRNA sequences from a longitudinal study on infants