PXD017535 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Tandem mass tag labeling to characterize muscle-specific proteome change in beef during early postmortem |
Description | Bovine longissimus lumborum (LL) and psoas major (PM) muscles biopsy samples were collected from four carcasses (n = 4) at 45 min, 12 h, and 36 h postmortem from a commercial beef processing facility. Proteome profile variation between beef LL and PM during the early postmortem period were evaluated by tandem mass tag labeling containing ten different isobaric compounds. |
HostingRepository | PRIDE |
AnnounceDate | 2020-02-19 |
AnnouncementXML | Submission_2020-02-19_01:56:56.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD017535 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Chaoyu Zhai |
SpeciesList | scientific name: Bos taurus (Bovine); NCBI TaxID: 9913; |
ModificationList | TMT6plex-126 reporter+balance reagent acylated residue; TMT6plex; Oxidation; monohydroxylated residue; Carbamidomethyl; iodoacetamide derivatized residue |
Instrument | orbitrap |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2020-02-17 01:21:12 | ID requested | |
⏵ 1 | 2020-02-19 01:56:57 | announced | |
2 | 2021-01-06 06:37:13 | announced | 2021-01-06: Updated publication reference for PubMed record(s): 32775575. |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: TMT, muscle-to-meat conversion |
Contact List
Mahesh Narayanan Nair |
contact affiliation | Department of Animal Sciences, Colorado State University |
contact email | mnair@colostate.edu |
lab head | |
Chaoyu Zhai |
contact affiliation | Colorado State University |
contact email | chaoyu.Zhai@colostate.edu |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/02/PXD017535 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD017535
- Label: PRIDE project
- Name: Tandem mass tag labeling to characterize muscle-specific proteome change in beef during early postmortem