PXD016470-2

PXD016470 is an original dataset announced via ProteomeXchange.

Title	Fractionated Human/E. coli Benchmark Data Set
Description	This benchmark data set is composed of two groups of fractionated samples. The first group contained a mixture of E. coli and human digest, and the second group contained a similar mixture except that the amount of E. coli was twice the amount as the first group.
HostingRepository	PRIDE
AnnounceDate	2020-04-06
AnnouncementXML	Submission_2020-06-12_04:54:34.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Robert Millikin
SpeciesList	scientific name: Escherichia coli; NCBI TaxID: 562; scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2019-11-27 03:42:50	ID requested
1	2020-04-05 23:20:12	announced
⏵ 2	2020-06-12 04:54:36	announced	2020-06-12: Updated publication reference for PubMed record(s): 32243168.

Millikin RJ, Shortreed MR, Scalf M, Smith LM, A Bayesian Null Interval Hypothesis Test Controls False Discovery Rates and Improves Sensitivity in Label-Free Quantitative Proteomics. J Proteome Res, 19(5):1975-1981(2020) [pubmed]

submitter keyword: Benchmark, technical, E. coli, proteomics

Lloyd M. Smith
contact affiliation	Department of Chemistry, University of Wisconsin, Madison, WI, United States
contact email	smith@chem.wisc.edu
lab head
Robert Millikin
contact affiliation	UW-Madison
contact email	rmillikin@wisc.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/04/PXD016470

PRIDE project URI

• PRIDE
  1. PXD016470
     1. Label: PRIDE project
     2. Name: Fractionated Human/E. coli Benchmark Data Set