PXD016427 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Effecst of metformin on the human gut micorbiome |
Description | To test the effects of metformin on the human gut micorbiome, we fist collected human stool samples. We processed the samples in vitro culturing under anaerobic condition for 24 hours using the rapidAIM assay and either and cultured them with metformin, or DMSO as a control. We know that metformin can alter the human gut microbiome and were interested in better analyzing which functional proceses were altered. |
HostingRepository | PRIDE |
AnnounceDate | 2021-03-16 |
AnnouncementXML | Submission_2021-03-16_15:13:19.149.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Caitlin Simopoulos |
SpeciesList | scientific name: human gut metagenome; NCBI TaxID: 408170; |
ModificationList | acetylated residue; monohydroxylated residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-11-25 02:11:52 | ID requested | |
⏵ 1 | 2021-03-16 15:13:19 | announced | |
2 | 2021-03-16 23:31:33 | announced | 2021-03-17: Updated project metadata. |
Publication List
Keyword List
submitter keyword: human gut microbiome, metaproteomics, metformin, drugs |
Contact List
Daniel Figeys |
contact affiliation | BMI, Faculty of Medicine, University of Ottawa |
contact email | dfigeys@uottawa.ca |
lab head | |
Caitlin Simopoulos |
contact affiliation | University of Ottawa |
contact email | csimopou@uottawa.ca |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD016427
- Label: PRIDE project
- Name: Effecst of metformin on the human gut micorbiome