PXD016388-2

PXD016388 is an original dataset announced via ProteomeXchange.

Title	Effects of SAHA on human gut microbiome
Description	The human stool samples were collected and processed for in vitro culturing under anaerobic condition using rapidAIM assay with or without SAHA, an lysine deacetylase inhibitor, for evaluating the effects of SAHA on human gut microbiome. Metaproteomics were used to analyze the microbiome composition and functions.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:50:45.677.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Xu Zhang
SpeciesList	scientific name: gut metagenome; NCBI TaxID: 749906;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2019-11-21 15:17:15	ID requested
1	2022-03-01 09:46:55	announced
⏵ 2	2023-11-14 08:50:46	announced	2023-11-14: Updated project metadata.

Dataset with its publication pending

submitter keyword: metaproteomics, microbiome

Daniel Figeys
contact affiliation	University of Ottawa
contact email	dfigeys@uottawa.ca
lab head
Xu Zhang
contact affiliation	University of Ottawa
contact email	cheuzhang@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/03/PXD016388

PRIDE project URI

• PRIDE
  1. PXD016388
     1. Label: PRIDE project
     2. Name: Effects of SAHA on human gut microbiome