PXD016369 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Purification of ubiquitylated proteins from HCT116 cells |
| Description | By hyperosmotic stimuli, a slight increase in the level of ubiquitylated proteins was observed. So we tried to identify the di-Gly peptides. |
| HostingRepository | PRIDE |
| AnnounceDate | 2024-10-22 |
| AnnouncementXML | Submission_2024-10-22_05:00:32.980.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Hikaru Tsuchiya |
| SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
| ModificationList | methylthiolated residue; ubiquitination signature dipeptidyl lysine; monohydroxylated residue |
| Instrument | Q Exactive |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2019-11-20 08:22:46 | ID requested | |
| 1 | 2020-02-18 01:11:13 | announced | |
| ⏵ 2 | 2024-10-22 05:00:33 | announced | 2024-10-22: Updated project metadata. |
Publication List
| Yasuda S, Tsuchiya H, Kaiho A, Guo Q, Ikeuchi K, Endo A, Arai N, Ohtake F, Murata S, Inada T, Baumeister W, Fern, รก, ndez-Busnadiego R, Tanaka K, Saeki Y, Stress- and ubiquitylation-dependent phase separation of the proteasome. Nature, 578(7794):296-300(2020) [pubmed] |
| 10.1038/s41586-020-1982-9; |
Keyword List
| submitter keyword: ubiquitylated proteins, LC-MS/MS |
Contact List
| Yasushi Saeki |
|---|
| contact affiliation | Laboratory of Protein Metabolism, Tokyo Metropolitan Institute of Medical Science |
| contact email | saeki-ys@igakuken.or.jp |
| lab head | |
| Hikaru Tsuchiya |
|---|
| contact affiliation | okyo Metropolitan Institute of Medical Science |
| contact email | tsuchiya-hk@igakuken.or.jp |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/02/PXD016369 |
| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD016369
- Label: PRIDE project
- Name: Purification of ubiquitylated proteins from HCT116 cells
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