PXD016197-2

PXD016197 is an original dataset announced via ProteomeXchange.

Title	Quantitative Proteomic Analysis of C57BL/6J mice after optic nerve crush Using iTRAQ Labeling
Description	We used two groups of C57BL/6J mice, one with optic nerve crush on one eye, and another with no crush as control. Three mice were subjected to optic nerve crush, with sample names 121, 113, 114 and two were used as control with sample names 118 and 119. For the optic nerve crush, a surgical peritomy was made behind and above the eyeball and the eye muscles were gently retracted to expose the optic nerve. Dumont #5 forceps (FST) were used to crush the optic nerve approximately 0.5-1 mm behind the globe without damaging retinal vessels or affecting the blood supply.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:05:08.410.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sanjoy Bhattacharya
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2019-11-08 01:32:41	ID requested
1	2020-05-26 13:21:06	announced
⏵ 2	2024-10-22 05:05:10	announced	2024-10-22: Updated project metadata.

10.1016/j.isci.2020.100836;

Chauhan MZ, Arcuri J, Park KK, Zafar MK, Fatmi R, Hackam AS, Yin Y, Benowitz L, Goldberg JL, Samarah M, Bhattacharya SK, Multi-Omic Analyses of Growth Cones at Different Developmental Stages Provides Insight into Pathways in Adult Neuroregeneration. iScience, 23(2):100836(2020) [pubmed]

submitter keyword: nerve crush,optic nerve, itraq

Sanjoy K. Bhattacharya, M. Tech., Ph. D.
contact affiliation	University of Miami Bascom Palmer Eye Institute
contact email	sbhattacharya@med.miami.edu
lab head
Sanjoy Bhattacharya
contact affiliation	Bascom Palmer Eye Institute, Department of Ophthalmology, Miller School of Medicine at University of Miami, Miami, FL 33136, USA
contact email	sbhattacharya@med.miami.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/05/PXD016197

PRIDE project URI

• PRIDE
  1. PXD016197
     1. Label: PRIDE project
     2. Name: Quantitative Proteomic Analysis of C57BL/6J mice after optic nerve crush Using iTRAQ Labeling