PXD015643-1

PXD015643 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Translatome Hypoxia-Acidosis, TMT-pulse SILAC
Description	Cells were grown in light (R0K0) SILAC media (AthenaES) for 7 days, they were then incubated in light media for 24 hours in respective condition (normoxia neutral (NN) pH: 7.4; hypoxia neutral (HN)1% O2, pH: 7.4; hypoxia acidosis (HA), 1% O2, pH=6) and pulsed with heavy (R10K8) SILAC media (AthenaES) for 16 hr (TMT-pSILAC) following treatment.
HostingRepository	PRIDE
AnnounceDate	2024-10-08
AnnouncementXML	Submission_2024-10-08_11:36:03.877.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD015643
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Nathan Balukoff
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	Biotin:Sigma-B1267; Label:13C(6)15N(2); Label:13C(6)15N(4); TMT6plex; Oxidation; Acetyl; Carbamidomethyl
Instrument	Orbitrap Fusion Lumos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-09-30 05:35:29	ID requested
⏵ 1	2024-10-08 11:36:04	announced

Publication List

10.6019/PXD015643;

10.6019/PXD015643;

Keyword List

ProteomeXchange project tag: Cancer (B/D-HPP), Biology/Disease-Driven Human Proteome Project (B/D-HPP), Human Proteome Project
submitter keyword: U87-MG,TMT-pulse SILAC

ProteomeXchange project tag: Cancer (B/D-HPP), Biology/Disease-Driven Human Proteome Project (B/D-HPP), Human Proteome Project

submitter keyword: U87-MG,TMT-pulse SILAC

Contact List

Stephen Lee
contact affiliation	Professor, Department of Biochemistry and Molecular Biology, University of Miami, Miller School of Medecine
contact email	stephenlee@med.miami.edu
lab head
Nathan Balukoff
contact affiliation	University of Miami Miller School of Medicine
contact email	nxb447@med.miami.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/09/PXD015643
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/09/PXD015643

PRIDE project URI

Repository Record List

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