PXD015333-1
PXD015333 is an original dataset announced via ProteomeXchange.
Dataset Summary
Title | The anti-MRSA compound KCR inhibits protein synthesis in Staphylococcus aureus |
Description | S aureus was treated in triplicate with 3-O-alpha-L-(2",3"-di-p-coumaroyl)rhamnoside (KCR), oxacillin or vehicle and quantitative proteomic analysis was carried out using isobaric tags and mass spectrometry. 1190 proteins were identified and 552 were affected by KCR (q<0.01). Ontology analysis identified 6 distinct translation-related categories that were affected by KCR (PIANO, 10% false-discovery rate) including structural constituent of ribosome, translation, rRNA binding, tRNA binding, tRNA processing and aminoacyl-tRNA ligase activity. Median fold changes (KCR vs Control) for small and large ribosomal components were 1.46 and 1.43 respectively. |
HostingRepository | MassIVE |
AnnounceDate | 2022-07-12 |
AnnouncementXML | Submission_2022-07-12_12:31:32.276.xml |
DigitalObjectIdentifier | |
ReviewLevel | Non peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Nick Carruthers |
SpeciesList | scientific name: Staphylococcus aureus; NCBI TaxID: 1280; |
ModificationList | L-methionine sulfoxide; S-carboxamidomethyl-L-cysteine |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
---|---|---|---|
0 | 2019-09-05 07:56:50 | ID requested | |
⏵ 1 | 2022-07-12 12:31:32 | announced |
Publication List
no publication |
Keyword List
submitter keyword: methicillin-resistant, Staphylococcus aureus, 3-O-alpha-L-(2",3"-di-p-coumaroyl)rhamnoside, KCR, proteomics, isobaric tags, mechanism of action |
Contact List
Nicholas Carruthers | |
---|---|
contact affiliation | Wayne State University |
contact email | carruthers@wayne.edu |
lab head | |
Nick Carruthers | |
contact affiliation | Wayne State U |
contact email | carruthers@wayne.edu |
dataset submitter |
Full Dataset Link List
MassIVE dataset URI |
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000084282/ |