PXD015164-2

PXD015164 is an original dataset announced via ProteomeXchange.

Title	Dataset of proteins of mouse macrophage cell line PMJ2R samples infected with Tick-borne encephalitis virus, strain Hypr original isolate
Description	Dataset for a comparative analysis of protein profiles of three series of mouse macrophage cell line PMJ2R samples including the control uninfected series (sample M) and infected with Tick-borne encephalitis virus, strain Hypr original isolate on the second (H2) and sixth day (H6) after infection was carried out using panoramic ultra-high resolution mass spectrometry. The analysis of measurements was performed using the proteomics search engine. The findings of the panoramic mass spectrometric analysis indicated that the protein composition of the cell samples is quite similar with respect to the number of identified proteins, protein composition and relative abundance. We identified a group of proteins specific for cell series H2 and H6.
HostingRepository	PRIDE
AnnounceDate	2019-11-27
AnnouncementXML	Submission_2019-11-27_06:52:11.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Anna Kaysheva
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2019-08-27 05:44:08	ID requested
1	2019-10-24 08:27:29	announced
⏵ 2	2019-11-27 06:52:12	announced	2019-11-27: Updated project metadata.

Dataset with its publication pending

curator keyword: Biomedical

submitter keyword: mouse macrophage, protein, panoramic mass spectrometry, label-free quantification, TBEV Hypr

Anna Kaysheva
contact affiliation	Biobanking Group, Branch of IBMC "Scientific and Educatioanl Center"
contact email	kaysheva1@gmail.com
lab head
Anna Kaysheva
contact affiliation	Institute of Biomedical Chemistry
contact email	kaysheva1@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/10/PXD015164

PRIDE project URI

• PRIDE
  1. PXD015164
     1. Label: PRIDE project
     2. Name: Dataset of proteins of mouse macrophage cell line PMJ2R samples infected with Tick-borne encephalitis virus, strain Hypr original isolate