PXD015163-1

PXD015163 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	HPLC-MS/MS analysis of plasma samples from patients with colorectal cancer
Description	We sought to identify a characteristic profile of proteins in blood plasma samples taken from patients with colorectal cancer using mass spectrometry. We obtained mass spectrometry data of 38 samples from patients with colorectal cancer and 41 samples from healthy volunteers and the data analysis were carried out using panoramic ultra-high resolution mass spectrometry. We carried out a comparative analysis for two series "case" and "control" of protein profiles, differently expressed proteins and proteins with posttranslational modifications.
HostingRepository	PRIDE
AnnounceDate	2020-04-02
AnnouncementXML	Submission_2020-04-02_06:24:28.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Anna Kaysheva
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-08-27 05:38:09	ID requested
⏵ 1	2020-04-02 06:24:30	announced

Publication List

Kopylov AT, Stepanov AA, Malsagova KA, Soni D, Kushlinsky NE, Enikeev DV, Potoldykova NV, Lisitsa AV, Kaysheva AL, Revelation of Proteomic Indicators for Colorectal Cancer in Initial Stages of Development. Molecules, 25(3):(2020) [pubmed]

Kopylov AT, Stepanov AA, Malsagova KA, Soni D, Kushlinsky NE, Enikeev DV, Potoldykova NV, Lisitsa AV, Kaysheva AL, Revelation of Proteomic Indicators for Colorectal Cancer in Initial Stages of Development. Molecules, 25(3):(2020) [pubmed]

Keyword List

ProteomeXchange project tag: Human Proteome Project
curator keyword: Biomedical
submitter keyword: human, plasma, colorectal cancer, protein

ProteomeXchange project tag: Human Proteome Project

curator keyword: Biomedical

submitter keyword: human, plasma, colorectal cancer, protein

Contact List

Anna Kaysheva
contact affiliation	Biobanking Group, Branch Of IBMC "Scientific and Educactional Center"
contact email	kaysheva1@gmail.com
lab head
Anna Kaysheva
contact affiliation	Institute of Biomedical Chemistry
contact email	kaysheva1@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/04/PXD015163
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/04/PXD015163

PRIDE project URI

Repository Record List

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