PXD015031 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Label-free Quantitative Acetylomics Revealed Toxoplasma gondii Genotype-Specific Acetylome Signatures |
Description | Distinct genotypic and pathogenicity differences exist between strains of the opportunistic protozoan Toxoplasma gondii. The label-free quantitative acetylomics approach was applied to investigate the differences in the level of acetylation between RH strain, PRU strain and PYS strain of T. gondii. The results showed that lysine acetylation in RH strain was the largest (458 acetylated proteins) among the three strains. The PYS strain had the second-largest acetylome (188 acetylated proteins), whereas lysine acetylation in PRU strain (115 acetylated proteins) was the smallest. Motif analysis revealed four, three and four motifs enriched from lysine acetylation sequences in RH strain, PRU strain and PYS strain respectively, suggesting specificity of acetyltransferases in these strains. Our analysis also identified 15 DAPs (differentially expressed acetylated proteins), 3 DAPs and 26 DAPs in RH strain vs PRU strain, PRU strain vs PYS strain and PYS strain vs RH strain, respectively. Compared with PYS strain and PRU strain, histone acetyltransferase and glycyl-tRNA synthase had higher expression levels in RH strain, reflecting genotype-specific differences in stress tolerance. These findings provide novel insight into the acetylomic profiles of major genotypes of T. gondii and provide an important resource for further analysis of the roles of the acetylated parasite proteins in the regulation of cellular functions. |
HostingRepository | PRIDE |
AnnounceDate | 2020-05-26 |
AnnouncementXML | Submission_2020-05-26_15:37:12.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Ze-Xiang Wang |
SpeciesList | scientific name: Toxoplasma; NCBI TaxID: 5810; |
ModificationList | acetylated residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-08-15 01:18:22 | ID requested | |
⏵ 1 | 2020-05-26 15:37:14 | announced | |
2 | 2024-10-22 05:05:53 | announced | 2024-10-22: Updated project metadata. |
Publication List
Wang ZX, Hu RS, Zhou CX, He JJ, M Elsheikha H, Zhu XQ, Genotype-Specific Acetylomic Signatures. Microorganisms, 7(11):(2019) [pubmed] |
Keyword List
submitter keyword: Toxoplasma gondii |
Genotype |
Tachyzoite |
Acetylation |
Label-free |
Contact List
Xing-Quan Zhu |
contact affiliation | Professor and Head, Department of Parasitology, Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Lanzhou, Gansu Province 730046,The People's Republic of China |
contact email | xingquanzhu1@hotmail.com |
lab head | |
Ze-Xiang Wang |
contact affiliation | Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences (LVRI, CAAS) |
contact email | neau601@126.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD015031
- Label: PRIDE project
- Name: Label-free Quantitative Acetylomics Revealed Toxoplasma gondii Genotype-Specific Acetylome Signatures