PXD014980 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Molecular analysis of clinically defined subsets of high-grade serous ovarian cancer |
| Description | The diversity and heterogeneity within high-grade serous ovarian cancer (HGSC) is not well understood. Comprehensive molecular analyses were performed including high-pass whole-genome sequencing, targeted deep DNA sequencing, RNA sequencing, reverse-phase protein arrays, mass spectrometry-based proteomics and phosphoproteomics, and immune profiling on primary and metastatic sites from highly clinically annotated HGSC samples. Samples were obtained pre-treatment based on a laparoscopic triage algorithm from patients who underwent R0 tumor debulking or received neoadjuvant chemotherapy (NACT) with excellent or poor response. |
| HostingRepository | PRIDE |
| AnnounceDate | 2024-10-22 |
| AnnouncementXML | Submission_2024-10-22_05:06:14.700.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Brian Hood |
| SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
| ModificationList | TMT6plex-126 reporter+balance reagent acylated residue; monohydroxylated residue |
| Instrument | Orbitrap Fusion Lumos |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2019-08-12 02:05:35 | ID requested | |
| 1 | 2020-05-26 17:30:06 | announced | |
| ⏵ 2 | 2024-10-22 05:06:15 | announced | 2024-10-22: Updated project metadata. |
Publication List
Keyword List
| submitter keyword: Human, Ovarian Cancer, Tissue |
Contact List
| Thomas P. Conrads |
|---|
| contact affiliation | Department of Obstetrics and Gynecology, Inova Fairfax Medical Campus, Inova Health System |
| contact email | conrads@whirc.org |
| lab head | |
| Brian Hood |
|---|
| contact affiliation | Women's Health Integrated Research Center |
| contact email | hoodb@whirc.org |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/05/PXD014980 |
| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD014980
- Label: PRIDE project
- Name: Molecular analysis of clinically defined subsets of high-grade serous ovarian cancer
