PXD014929 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Mass spectrometry analysis following chromatin fractionation in growing and senescent cells |
Description | This project contains the raw and result files for a mass spectrometry analysis comparing the abundance of proteins following chromatin fractionation in growing cells and in senescent cells for the WI-38hTERT/GFP-RAF1-ER cell line. Two replicas were analysed for each cell condition. The data are used to support a study on using polymer modelling to investigate the roles of heterochromatin and lamina interactions on chromosome reorganisation in senescence. |
HostingRepository | PRIDE |
AnnounceDate | 2019-09-25 |
AnnouncementXML | Submission_2019-09-25_10:47:52.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD014929 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Michael Chiang |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | L-cysteine residue; residues isobaric at 113.084064 Da; residues isobaric at 128.058578 Da; Deamidated; TMT6plex; L-tyrosine residue; Oxidation; Carbamidomethyl; residues isobaric at 71.037114 Da |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-08-06 05:34:25 | ID requested | |
⏵ 1 | 2019-09-25 10:47:53 | announced | |
2 | 2019-10-25 05:23:43 | announced | 2019-10-25: Updated publication reference for PubMed record(s): 31533042. |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: Human, lung fibroblast, LC-MSMS |
Contact List
Hisham Mohammed |
contact affiliation | Cancer Early Detection Advanced Research Center, Knight Cancer Institute, Department of Molecular & Medical Genetics, Oregon Health & Science University, Portland, OR 97239, U.S.A. |
contact email | mohammeh@ohsu.edu |
lab head | |
Michael Chiang |
contact affiliation | University of Edinburgh |
contact email | c.h.m.chiang@sms.ed.ac.uk |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/09/PXD014929 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD014929
- Label: PRIDE project
- Name: Mass spectrometry analysis following chromatin fractionation in growing and senescent cells