PXD014699-1

PXD014699 is an original dataset announced via ProteomeXchange.

Title	Arabidopsis thaliana proteome label-free shotgun digested by Legumain in the presence of various denaturants
Description	Proteomic optimisation of Arabidopsis thaliana proteome generated using legumain (cleave C-terminal of asparagine/aspartic acid) as protease in the presence of various concentration of denaturants such as acetonitrile, urea, and guanidinium-HCl.
HostingRepository	PRIDE
AnnounceDate	2020-01-20
AnnouncementXML	Submission_2020-01-20_01:04:52.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Fatih Demir
SpeciesList	scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationList	iodoacetamide derivatized residue
Instrument	maXis

Revision	Datetime	Status	ChangeLog Entry
0	2019-07-22 07:51:09	ID requested
⏵ 1	2020-01-20 01:04:53	announced
2	2024-10-22 03:58:51	announced	2024-10-22: Updated project metadata.

Soh WT, Demir F, Dall E, Perrar A, Dahms SO, Kuppusamy M, Brandstetter H, Huesgen PF, ExteNDing Proteome Coverage with Legumain as a Highly Specific Digestion Protease. Anal Chem, 92(4):2961-2971(2020) [pubmed]

submitter keyword: Arabidopsis Legumain Denaturants

Pitter Florian Huesgen
contact affiliation	Forschungszentrum Juelich GmbH ZEA-3 Analytics Wilhelm-Johnen-Str D-52425 Juelich Germany
contact email	p.huesgen@fz-juelich.de
lab head
Fatih Demir
contact affiliation	Forschungszentrum Juelich ZEA-3 Analytics Wilhelm-Johnen-Str D-52425 Juelich
contact email	f.demir@fz-juelich.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/01/PXD014699

PRIDE project URI

• PRIDE
  1. PXD014699
     1. Label: PRIDE project
     2. Name: Arabidopsis thaliana proteome label-free shotgun digested by Legumain in the presence of various denaturants