PXD014469-1

PXD014469 is an original dataset announced via ProteomeXchange.

Title	C. elegans wild type compared to vhl-1(ok161) RBPome and Proteome
Description	We performed RNA interactome capture in wild type compared to vhl-1(ok161) loss-of-function worms. These data are combined with the proteome to distinguish changes in RBP abundance from differential binding events.
HostingRepository	PRIDE
AnnounceDate	2020-01-08
AnnouncementXML	Submission_2020-01-08_09:06:02.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Francesca Fabretti
SpeciesList	scientific name: Caenorhabditis elegans; NCBI TaxID: 6239;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive Plus

Revision	Datetime	Status	ChangeLog Entry
0	2019-07-03 02:02:39	ID requested
⏵ 1	2020-01-08 09:06:04	announced
2	2024-10-22 04:06:47	announced	2024-10-22: Updated project metadata.

Esmaillie R, Ignarski M, Bohl K, Kr, ü, ger T, Ahmad D, Seufert L, Schermer B, Benzing T, M, ü, ller RU, Fabretti F, Activation of Hypoxia-Inducible Factor Signaling Modulates the RNA Protein Interactome in Caenorhabditis elegans. iScience, 22():466-476(2019) [pubmed]

submitter keyword: vhl-1, hif-1, RBP, RNA-binding protein, HIF, Hypoxia, C. elegans

Bernhard Schermer
contact affiliation	Nephrolab Department II of Internal Medicine, University of Cologne
contact email	bernhard.schermer@uk-koeln.de
lab head
Francesca Fabretti
contact affiliation	Uniklinik Köln
contact email	francesca.fabretti@uk-koeln.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/01/PXD014469

PRIDE project URI

• PRIDE
  1. PXD014469
     1. Label: PRIDE project
     2. Name: C. elegans wild type compared to vhl-1(ok161) RBPome and Proteome