PXD013954 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Systematic analysis of the lysine succinylome in the model medicinal mushroom Ganoderma lucidum |
Description | Ganoderma lucidum, one of the best-known medicinal mushrooms in the world, produces more than 400 different bioactive compounds. By the combination of affinity enrichment and high-resolution LC-MS/MS analysis, large-scale lysine succinylome analysis was performed. Altogether, 742 lysine succinylation sites in 382 protein groups were identified. Bioinformatics analysis revealed that the modified proteins were involved in multiple cellular functions and participated in a wide variety of biological processes such as carbon metabolism and biosynthesis of secondary metabolites. |
HostingRepository | PRIDE |
AnnounceDate | 2019-07-25 |
AnnouncementXML | Submission_2019-07-25_07:21:23.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Guangyuan Wang |
SpeciesList | scientific name: Ganoderma lucidum; NCBI TaxID: 5315; |
ModificationList | N6-succinyl-L-lysine |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-05-21 05:25:08 | ID requested | |
⏵ 1 | 2019-07-25 07:21:24 | announced | |
Publication List
Wang G, Xu L, Yu H, Gao J, Guo L, Systematic analysis of the lysine succinylome in the model medicinal mushroom Ganoderma lucidum. BMC Genomics, 20(1):585(2019) [pubmed] |
Keyword List
submitter keyword: lysine succinylome,Ganoderma lucidum,LC-MS/MS |
Contact List
Lizhong Guo |
contact affiliation | Shandong Province Key Laboratory of Applied Mycology, College of Life Sciences, Qingdao Agricultural University, Changcheng Road, No.700, Qingdao, 266109, China |
contact email | glz119@126.com |
lab head | |
Guangyuan Wang |
contact affiliation | College of Life Sciences, Shandong Province Key Laboratory of Applied Mycology, Qingdao Agricultural University, Qingdao 266109, China |
contact email | gywang@qau.edu.cn |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/07/PXD013954 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD013954
- Label: PRIDE project
- Name: Systematic analysis of the lysine succinylome in the model medicinal mushroom Ganoderma lucidum