PXD013702 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Protein identification in 1000 U2OS cells |
Description | In this study, we aim to optimize sample processing methods using a conventional in-solution proteomic sample processing workflow. We then compared protein idetnfication numbers withour improved sample processing methods versus the original method, in 1000 U2OS human osteosarcoma cells. |
HostingRepository | PRIDE |
AnnounceDate | 2019-05-06 |
AnnouncementXML | Submission_2019-07-26_02:40:15.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Yu Lu |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | iodoacetamide derivatized residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-05-03 03:44:54 | ID requested | |
1 | 2019-05-06 06:24:58 | announced | |
⏵ 2 | 2019-07-26 02:40:17 | announced | Updated publication reference for PubMed record(s): 31318197. |
Publication List
Wu R, Xing S, Badv M, Didar TF, Lu Y, Step-Wise Assessment and Optimization of Sample Handling Recovery Yield for Nanoproteomic Analysis of 1000 Mammalian Cells. Anal Chem, 91(16):10395-10400(2019) [pubmed] |
Keyword List
submitter keyword: 1000 cells, LC-MS, U2OS, osteosarcoma, sample recovery yield, sam ple processing |
Contact List
Yu Lu |
contact affiliation | Department of Biochemistry and Biomedical Sciences McMaster University |
contact email | yu.lu@mcmaster.ca |
lab head | |
Yu Lu |
contact affiliation | McMaster University |
contact email | yu.lu@mcmaster.ca |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/05/PXD013702 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD013702
- Label: PRIDE project
- Name: Protein identification in 1000 U2OS cells