PXD013127 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | 786-O ubiquitiome |
Description | 786-O WT and BAP1-KO cells were cultured in heavy (13C6-L-arginine, 13C6-L-lysine, Cambridge Isotope Lab) and light (unlabeled L-arginine and L-lysine) SILAC RPMI-1640 medium (Thermo Fisher Scienific), respectively. After more than 10 passages, cells were lysed with 8 M urea and 5 mg protein from each group were mix. The ubiquitinated peptide enrichment was performed using PTMScan® (Cell Signaling Technology, #5562) following the manufacturer’s instructions. |
HostingRepository | PRIDE |
AnnounceDate | 2019-04-18 |
AnnouncementXML | Submission_2019-04-18_02:08:54.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Pengsheng Chen |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | ubiquitinylated lysine |
Instrument | Orbitrap Fusion Lumos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-03-18 08:36:25 | ID requested | |
⏵ 1 | 2019-04-18 02:08:55 | announced | |
Publication List
Chen P, Wang H, Zhang W, Chen Y, Lv Y, Wu D, Guo M, Deng H, Loss of BAP1 Results in Growth Inhibition and Enhances Mesenchymal-Epithelial Transition in Kidney Tumor Cells. Mol Cell Proteomics, 18(7):1320-1329(2019) [pubmed] |
Keyword List
submitter keyword: ccRCC 786-O ubiquitiome |
Contact List
Haiteng Deng |
contact affiliation | Shool of Life Sciences, Tsinghua University, China |
contact email | dht@mail.tsinghua.edu.cn |
lab head | |
Pengsheng Chen |
contact affiliation | Tsinghua Univ |
contact email | 878357025@qq.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/04/PXD013127 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD013127
- Label: PRIDE project
- Name: 786-O ubiquitiome