PXD013009 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Quantitative proteomic analysis of differentially expressed proteins in tubers of potato plants differing in resistance to Dickeya solani |
Description | To identify differently expressed proteins in tuber tissue of potato cultivars and diploid interspecific hybrids of Solanum, differing in resistance to Dickeya solani, comparative analysis was performed. Two highly resistant (Bea and Humalda) and three susceptible (Irys, Katahdin, Ulster Supreme) potato cultivars, as well as the highly resistant (DG 00-270) and the susceptible (DG 08-305) diploid clones, were studied. DG 00-270 exhibited higher resistance to D. solani than the cultivars Bea and Humalda. Proteins were extracted from wounded potato tubers inoculated with bacteria at an early symptomatic phase and from controls, i.e., intact tubers and wounded mock-inoculated tubers. Protein profiles were analyzed using nano-liquid chromatography coupled with tandem mass spectrometry (LC-MS-MS/MS). |
HostingRepository | PRIDE |
AnnounceDate | 2019-05-21 |
AnnouncementXML | Submission_2019-06-14_02:44:12.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD013009 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Michał Kistowski |
SpeciesList | scientific name: Solanum tuberosum (Potato); NCBI TaxID: 4113; |
ModificationList | Methylthio; Oxidation; Carbamidomethyl |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-03-07 06:46:30 | ID requested | |
1 | 2019-05-21 08:13:51 | announced | |
⏵ 2 | 2019-06-14 02:44:13 | announced | Updated publication reference for DOI(s): 10.1007/s11104-019-04125-7. |
3 | 2023-11-14 06:56:27 | announced | 2023-11-14: Updated project metadata. |
Publication List
Keyword List
curator keyword: Biological |
submitter keyword: potato tubers, protein expression, Dickeya solani, resistance |
Contact List
Michał Dadlez |
contact affiliation | Mass Spectrometry Laboratory, Institute of Biochemistry and Biophysics PAS |
contact email | michald@ibb.waw.pl |
lab head | |
Michał Kistowski |
contact affiliation | Institute of Biochemistry and Biophysics PAS |
contact email | mkisto@gmail.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD013009
- Label: PRIDE project
- Name: Quantitative proteomic analysis of differentially expressed proteins in tubers of potato plants differing in resistance to Dickeya solani