PXD012892-1

PXD012892 is an original dataset announced via ProteomeXchange.

Title	Identification of human FGF9 IRES interacting proteins
Description	We have previously shown that FGF9 is overexpressed in hypoxia through the IRES located in the 5’UTR. To identify the protein that binds to FGF9 IRES and controls FGF9 protein synthesis in hypoxia, FGF9 IRES RNA was in vitro synthesized and used to pulled-down interacting proteins. The RNA-protein complexes were first visualized by sliver staining, followed by cutting specific bands for protein identification using matrix-assisted laser desorption/ionization time-of-flight mass spectrometer (MALDI-TOF MS).
HostingRepository	PRIDE
AnnounceDate	2019-11-13
AnnouncementXML	Submission_2019-11-12_18:57:21.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	H. Sunny Sun
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	ultraflex

Revision	Datetime	Status	ChangeLog Entry
0	2019-02-27 06:25:54	ID requested
⏵ 1	2019-11-12 18:57:23	announced
2	2024-10-22 04:53:58	announced	2024-10-22: Updated project metadata.

Chen TM, Lai MC, Li YH, Chan YL, Wu CH, Wang YM, Chien CW, Huang SY, Sun HS, Tsai SJ, hnRNPM induces translation switch under hypoxia to promote colon cancer development. EBioMedicine, 41():299-309(2019) [pubmed]

submitter keyword: Human, FGF9, IRES, hypoxia, MALDI-TOF MS

H. Sunny Sun
contact affiliation	Center for Genomic Medicine, National Cheng Kung University, Tainan 70101, Taiwan; Institute of Molecular Medicine, National Cheng Kung University, Tainan 70101, Taiwan.
contact email	hssun@mail.ncku.edu.tw
lab head
H. Sunny Sun
contact affiliation	H. Sunny Sun, Ph.D. Director and Professor, Institute of Molecular Medicine Director, Center for Genomic Medicine National Cheng Kung University Medical College 1 University road Tainan 70101, Taiwan PHONE: 886-6-2353535 ext. 3648, 3645 FAX: 886-6-2095845 email: hssun@mail.ncku.edu.tw
contact email	hssun@mail.ncku.edu.tw
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/11/PXD012892

PRIDE project URI

• PRIDE
  1. PXD012892
     1. Label: PRIDE project
     2. Name: Identification of human FGF9 IRES interacting proteins