PXD012877 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Modeling protein destiny in developing tomato fruit |
Description | Proteomics and transcriptomics data of tomato fruits at 9 developmental stages were used to calculate with a mathematical model the rate constants of synthesis and degradation for over 1,000 proteins. |
HostingRepository | PRIDE |
AnnounceDate | 2019-05-06 |
AnnouncementXML | Submission_2019-05-06_07:02:57.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Mélisande Blein-Nicolas |
SpeciesList | scientific name: Solanum lycopersicum; NCBI TaxID: 4081; |
ModificationList | No PTMs are included in the dataset |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-02-26 01:44:17 | ID requested | |
⏵ 1 | 2019-05-06 07:02:58 | announced | |
2 | 2019-11-06 00:33:33 | announced | 2019-11-06: Updated publication reference for PubMed record(s): 31681351, 31015299. |
Publication List
Belouah I, Nazaret C, P, é, triacq P, Prigent S, B, é, nard C, Mengin V, Blein-Nicolas M, Denton AK, Balliau T, Aug, é S, Bouchez O, Mazat JP, Stitt M, Usadel B, Zivy M, Beauvoit B, Gibon Y, Colombi, é S, Modeling Protein Destiny in Developing Fruit. Plant Physiol, 180(3):1709-1724(2019) [pubmed] |
Keyword List
curator keyword: Biological |
submitter keyword: protein turnover, systems biology, LC-MS/MS, transcriptome |
Contact List
Sophie Colombié |
contact affiliation | UMR 1332 BFP, INRA, Univ Bordeaux, F33883 Villenave d’Ornon, France |
contact email | sophie.colombie@inra.fr |
lab head | |
Mélisande Blein-Nicolas |
contact affiliation | Génétique Quantitative et Évolution – Le Moulon INRA – Université Paris-Sud – CNRS – AgroParisTech Ferme du Moulon 91190 Gif-sur-Yvette France |
contact email | melisande.blein-nicolas@inra.fr |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/05/PXD012877 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD012877
- Label: PRIDE project
- Name: Modeling protein destiny in developing tomato fruit