PXD012661 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | RNA-bound proteome of Mycobacterium bovis |
Description | The dataset accompanying a publication describing the RNA degradosome components in Mycobacterium tuberculosis (Mtb). The RNA-bound proteome was determined by affinity purification of protein-RNA complexes from Mycobacterium bovis cells fed with 4-thiouridine and crosslinked via photoactivation at 365nm. Affinity purified RNA-protein complexes were subjected to LC-MS analysis |
HostingRepository | PRIDE |
AnnounceDate | 2019-04-01 |
AnnouncementXML | Submission_2019-04-12_01:39:30.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Przemyslaw Plocinski |
SpeciesList | scientific name: Mycobacterium bovis; NCBI TaxID: 1765; |
ModificationList | monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | LTQ Orbitrap Velos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-02-11 01:50:24 | ID requested | |
1 | 2019-04-01 00:36:05 | announced | |
⏵ 2 | 2019-04-12 01:39:31 | announced | Updated publication reference for PubMed record(s): 30957850. |
Publication List
P, ł, oci, ń, ski P, Macios M, Houghton J, Niemiec E, P, ł, oci, ń, ska R, Brzostek A, S, ł, omka M, Dziadek J, Young D, Dziembowski A, Proteomic and transcriptomic experiments reveal an essential role of RNA degradosome complexes in shaping the transcriptome of Mycobacterium tuberculosis. Nucleic Acids Res, 47(11):5892-5905(2019) [pubmed] |
Keyword List
curator keyword: Biomedical |
submitter keyword: tuberculosis, RNA bound proteome, RNA degradosome |
Contact List
Andrzej Dziembowski |
contact affiliation | Institute of Biochemistry and Biophysics, Polish Academy of Sciences |
contact email | andrzej.dziembowski.ibb@gmail.com |
lab head | |
Przemyslaw Plocinski |
contact affiliation | Institute of Medical Biology of the Polish Academy of Sciences |
contact email | przemyslaw.plocinski@gmail.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/04/PXD012661 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD012661
- Label: PRIDE project
- Name: RNA-bound proteome of Mycobacterium bovis